Hoffmann Research Group
Publications at FLI
2019
- DREAM and RB cooperate to induce gene repression and cell-cycle arrest in response to p53 activation.
Uxa S, Bernhart SH, Mages CFS, Fischer M, Kohler R, Hoffmann S, Stadler PF, Engeland K, Müller GA
Nucleic Acids Res 2019, 47(17), 9087-9103.
2018
- DIEGO: Detection of Differential Alternative Splicing using Aitchison's Geometry.
Doose G, Bernhart SH, Wagener R, Hoffmann S
Bioinformatics 2018, 34(6), 1066-8 - RBFOX2 and alternative splicing in B-cell lymphoma.
Quentmeier H, Pommerenke C, Bernhart SH, Dirks WG, Hauer V, Hoffmann S, Nagel S, Siebert R, Uphoff CC, Zaborski M, Drexler HG, ICGC MMML-Seq Consortium
Blood Cancer J 2018, 8(8), 77 - Higher gene expression stability during aging in long-lived giant mole-rats than in short-lived rats.
Sahm A, Bens M, Henning Y, Vole C, Groth M, Schwab M, Hoffmann S, Platzer* M, Szafranski* K, Dammann* P
Aging (Albany NY) 2018, 10(12), 3938-56 * equal contribution
2017
- Generalized enhanced suffix array construction in external memory.
Louza FA, Telles GP, Hoffmann S, Ciferri CDA
Algorithms Mol Biol 2017, 12, 26
2016
- Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells.
Hölzer M, Krähling V, Amman F, Barth E, Bernhart SH, Carmelo VAO, Collatz M, Doose G, Eggenhofer F, Ewald J, Fallmann J, Feldhahn LM, Fricke M, Gebauer J, Gruber AJ, Hufsky F, Indrischek H, Kanton S, Linde J, Mostajo N, Ochsenreiter R, Riege K, Rivarola-Duarte L, Sahyoun AH, Saunders SJ, Seemann SE, Tanzer A, Vogel B, Wehner S, Wolfinger MT, Backofen R, Gorodkin J, Grosse I, Hofacker I, Hoffmann S, Kaleta C, Stadler PF, Becker S, Marz M
Sci Rep 2016, 6, 34589