Hoffmann Research Group

Publications at FLI

2021

  • An analysis of methylome evolution in primates
    Sahm** A, Koch P, Horvath S, Hoffmann** S
    Mol Biol Evol 2021 (epub ahead of print) ** co-corresponding authors
  • Loss of hepatic Mboat7 leads to liver fibrosis.
    Thangapandi VR, Knittelfelder O, Brosch M, Patsenker E, Vvedenskaya O, Buch S, Hinz S, Hendricks A, Nati M, Herrmann A, Rekhade DR, Berg T, Matz-Soja M, Huse K, Klipp E, Pauling JK, Wodke JA, Miranda Ackerman J, Bonin Mv, Aigner E, Datz C, von Schönfels W, Nehring S, Zeissig S, Röcken C, Dahl A, Chavakis T, Stickel F, Shevchenko A, Schafmayer C, Hampe J, Subramanian P
    Gut 2021, 70(5), 940-50

2020

  • Pan-cancer analysis of whole genomes.
    Campbell PJ, Getz G, Korbel Jea, ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium
    Nature 2020, 578(7793), 82-93
  • Dichotomous Impact of Myc on rRNA Gene Activation and Silencing in B Cell Lymphomagenesis.
    Joshi* G, Eberhardt* AO, Lange L, Winkler R, Hoffmann S, Kosan C, Bierhoff H
    Cancers (Basel) 2020, 12(10), E3009. doi: 10.3390/cancers12103 * equal contribution
  • Bashing irreproducibility with shournal
    Kirchner T, Riege K, Hoffmann S
    bioRxiv 2020, https://doi.org/10.1101/2020.08.
  • ConCysFind: a pipeline tool to predict conserved amino acids of protein sequences across the plant kingdom
    Moore M, Wesemann C, Gossmann N, Sahm A, Krüger J, Sczyrba A, Dietz KJ
    BMC Bioinformatics 2020, 21(1), 490
  • Dissecting the DNA binding landscape and gene regulatory network of p63 and p53.
    Riege K, Kretzmer H, Sahm A, McDade SS, Hoffmann S, Fischer M
    Elife 2020, 9, e63266
  • Tumor suppressor p53: from engaging DNA to target gene regulation.
    Sammons*/** MA, Nguyen*/** TAT, McDade*/** SS, Fischer*/** M
    Nucleic Acids Res 2020, 48(16), 8848-69 * equal contribution, ** co-corresponding authors
  • Increased prostaglandin-D2 in male STAT3-deficient hearts shifts cardiac progenitor cells from endothelial to white adipocyte differentiation.
    Stelling E, Ricke-Hoch M, Erschow S, Hoffmann S, Bergmann AK, Heimerl M, Pietzsch S, Battmer K, Haase A, Stapel B, Scherr M, Balligand JL, Binah O, Hilfiker-Kleiner D
    PLoS Biol 2020, 18(12), e3000739

2019

  • Conservation and divergence of the p53 gene regulatory network between mice and humans.
    Fischer M
    Oncogene 2019, 38(21), 4095-109