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Publications

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2025

  • Dynamics of HBV biomarkers during nucleos(t)ide analog treatment: A 14-year study.
    van Bömmel F, Degasperi E, van Bömmel A, Facchetti F, Sambarino D, Deichsel D, Brehm J, Kamga Wouambo R, Maier M, Pfefferkorn M, Berg T, Lampertico P
    Hepatol Commun 2025, 9(6)
  • Author Correction: Large-scale benchmarking of circRNA detection tools reveals large differences in sensitivity but not in precision.
    Vromman M, Anckaert J, Bortoluzzi S, Buratin A, Chen CY, Chu Q, Chuang TJ, Dehghannasiri R, Dieterich C, Dong X, Flicek P, Gaffo E, Gu W, He C, Hoffmann S, Izuogu O, Jackson MS, Jakobi T, Lai EC, Nuytens J, Salzman J, Santibanez-Koref M, Stadler P, Thas O, Vanden Eynde E, Verniers K, Wen G, Westholm J, Yang L, Ye CY, Yigit N, Yuan GH, Zhang J, Zhao F, Vandesompele J, Volders PJ
    Nat Methods 2025 (epub ahead of print)
  • "Yin-Yang" of PARP1 in genotoxic and inflammatory response.
    Wang S, Wu Y, Zong W, Wang ZQ
    DNA Repair (Amst) 2025 (epub ahead of print)
  • Gene regulation by convergent promoters.
    Wiechens E, Vigliotti* F, Siniuk* K, Schwarz R, Schwab K, Riege K, van Bömmel A, Görlich I, Bens M, Sahm A, Groth M, Sammons MA, Loewer A, Hoffmann S, Fischer M
    Nat Genet 2025, 57(1), 206-17 * equal contribution
  • Emerging roles of transfer RNA fragments in the CNS.
    Winek** K, Soreq** H
    Brain 2025 (epub ahead of print) ** co-corresponding authors
  • DNA damage response and genomic instability disorder: Meeting report of the 20th Ataxia-Telangiectasia Workshop (ATW-2024) in conjunction with the 15th international symposium on DNA damage response and human disease (isDDRHD-2024).
    Xia Y, Wang** ZQ, Xu** X
    DNA Repair (Amst) 2025 (epub ahead of print) ** co-corresponding authors

2024

  • INHBA is enriched in HPV-negative oropharyngeal squamous cell carcinoma and promotes cancer progression.
    Abou Kors T, Hofmann L, Betzler A, Payer K, Bens M, Truong J, von Witzleben A, Thomas J, Kraus JM, Kalaajieh R, Huber D, Ezić J, Benckendorff J, Greve J, Schuler PJ, Ottensmeier CH, Kestler HA, Hoffmann TK, Theodoraki MN, Brunner C, Laban S
    Cancer Res Commun 2024, 4(2), 571-87
  • Multi-omics analysis of overexpressed tumor-associated proteins: gene expression, immunopeptide presentation, and antibody response in oropharyngeal squamous cell carcinoma, with a focus on cancer-testis antigens.
    Abou Kors T, Meier M, Mühlenbruch L, Betzler AC, Oliveri F, Bens M, Thomas J, Kraus JM, Doescher J, von Witzleben A, Hofmann L, Ezic J, Huber D, Benckendorff J, Barth TFE, Greve J, Schuler PJ, Brunner C, Blackburn JM, Hoffmann TK, Ottensmeier C, Kestler HA, Rammensee HG, Walz JS, Laban S
    Front Immunol 2024, 15, 1408173
  • Integrative bioinformatics characterization of ageing macrophages
    Akinyemi DE
    Dissertation 2024, Jena, Germany
  • Correction: IER3IP1-mutations cause microcephaly by selective inhibition of ER-Golgi transport.
    Anitei M, Bruno F, Valkova C, Dau T, Cirri E, Mestres I, Calegari F, Kaether C
    Cell Mol Life Sci 2024, 81(1), 465