Publications

2021

• RNA:DNA triple helices: from peculiar structures to pervasive chromatin regulators.
  Greifenstein* AA, Jo* S, Bierhoff H
  Essays Biochem 2021, 65(4), 731-40 * equal contribution
  
• Cell Type-Specific Role of RNA Nuclease SMG6 in Neurogenesis.
  Guerra GM, May D, Kroll T, Koch P, Groth M, Wang** ZQ, Li TL, Grigaravičius** P
  Cells 2021, 10(12), 3365 ** co-corresponding authors
  
• Regeneration in starved planarians depends on TRiC/CCT subunits modulating the unfolded protein response.
  Gutiérrez-Gutiérrez* Ó, Felix* DA, Salvetti A, Amro EM, Thems A, Pietsch S, Koeberle A, Rudolph KL, González-Estévez C
  EMBO Rep 2021, 22(8), e52905 * equal contribution
  
• Power and Weakness of Repetition - Evaluating the Phylogenetic Signal From Repeatomes in the Family Rosaceae With Two Case Studies From Genera Prone to Polyploidy and Hybridization ( Rosa and Fragaria).
  Herklotz V, Kovařík A, Wissemann V, Lunerová J, Vozárová R, Buschmann S, Olbricht K, Groth M, Ritz CM
  Front Plant Sci 2021, 12, 738119
  
• High Yap and Mll1 promote a persistent regenerative cell state induced by Notch signaling and loss of p53.
  Heuberger J, Grinat J, Kosel F, Liu L, Kunz S, Vidal RO, Keil M, Haybaeck J, Robine S, Louvard D, Regenbrecht C, Sporbert A, Sauer S, von Eyss B, Sigal M, Birchmeier W
  Proc Natl Acad Sci U S A 2021, 118(22), e2019699118
  
• Alternative Animal Models of Aging Research
  Holtze S, Gorshkova E, Braude S, Cellerino A, Dammann P, Hildebrandt TB, Hoeflich A, Hoffmann S, Koch P, Terzibasi Tozzini E, Skulachev M, Skulachev VP, Sahm A
  Front Mol Biosci 2021, 8, doi: 10.3389/fmolb.2021.660959.
  
• PoSeiDon: a Nextflow pipeline for the detection of evolutionary recombination events and positive selection.
  Hölzer M, Marz M
  Bioinformatics 2021, 37(7), 1018-20
  
• The Role of MacroH2A Histone Variants in Cancer.
  Hsu CJ, Meers O, Buschbeck M, Heidel FH
  Cancers (Basel) 2021, 13(12), 3003
  
• Mutational mechanisms shaping the coding and noncoding genome of germinal center derived B-cell lymphomas.
  Hübschmann D, Kleinheinz K, Wagener R, Bernhart SH, López C, Toprak UH, Sungalee S, Ishaque N, Kretzmer H, Kreuz M, Waszak SM, Paramasivam N, Ammerpohl O, Aukema SM, Beekman R, Bergmann AK, Bieg M, Binder H, Borkhardt A, Borst C, Brors B, Bruns P, Carrillo de Santa Pau E, Claviez A, Doose G, Haake A, Karsch D, Haas S, Hansmann ML, Hoell JI, Hovestadt V, Huang B, Hummel M, Jäger-Schmidt C, Kerssemakers JNA, Korbel JO, Kube D, Lawerenz C, Lenze D, Martens JHA, Ott G, Radlwimmer B, Reisinger E, Richter J, Rico D, Rosenstiel P, Rosenwald A, Schillhabel M, Stilgenbauer S, Stadler PF, Martín-Subero JI, Szczepanowski M, Warsow G, Weniger MA, Zapatka M, Valencia A, Stunnenberg HG, Lichter P, Möller P, Loeffler M, Eils R, Klapper W, Hoffmann S, Trümper L, ICGC MMML-Seq consortium, ICGC DE-Mining consortium, BLUEPRINT consortium, Küppers R, Schlesner M, Siebert R
  Leukemia 2021, 35(7), 2002-16 published during change of institution
  
• Therole of the transcriptional repressor TRPS1 in rhabdomyosarcoma and myogenesis
  Hüttner S
  Dissertation 2021, Jena, Germany