Former Research Group - Platzer (until 2018)

Publications

2018

  • The Pseudogenes of Barley.
    Prade VM, Gundlach H, Twardziok S, Chapman B, Tan C, Langridge P, Schulman AH, Stein N, Waugh R, Zhang G, Platzer M, Li C, Spannagl M, Mayer KFX
    Plant J 2018, 93(3), 502-14
  • Impairing L-Threonine Catabolism Promotes Healthspan through Methylglyoxal-Mediated Proteohormesis.
    Ravichandran M, Priebe S, Grigolon G, Rozanov L, Groth M, Laube B, Guthke R, Platzer M, Zarse K, Ristow M
    Cell Metab 2018, 27(4), 914-25
  • Haplotypes composed of minor frequency single nucleotide polymorphism of tnf gene protect from progression into sepsis: A study using the new sepsis classification.
    Retsas T, Huse K, Lazaridis LD, Karampela N, Bauer M, Platzer M, Kolonia V, Papageorgiou E, Giamarellos-Bourboulis EJ, Dimopoulos G
    Int J Infect Dis 2018, 67, 102-6
  • Higher gene expression stability during aging in long-lived giant mole-rats than in short-lived rats.
    Sahm A, Bens M, Henning Y, Vole C, Groth M, Schwab M, Hoffmann S, Platzer* M, Szafranski* K, Dammann* P
    Aging (Albany NY) 2018, 10(12), 3938-56 * equal contribution
  • Long-lived rodents reveal signatures of positive selection in genes associated with lifespan.
    Sahm A, Bens M, Szafranski K, Holtze S, Groth M, Görlach M, Calkhoven C, Müller C, Schwab M, Kraus J, Kestler HA, Cellerino A, Burda H, Hildebrandt T, Dammann P, Platzer M
    PLoS Genet 2018, 14(3), e1007272
  • The Definition of Open Reading Frame Revisited.
    Sieber P, Platzer M, Schuster S
    Trends Genet 2018, 34(3), 167-70
  • Rapidly evolving changes and gene loss associated with host switching in Corynebacterium pseudotuberculosis.
    Viana MVC, Sahm A, Góes Neto A, Figueiredo HCP, Wattam AR, Azevedo V
    PLoS One 2018, 13(11), e0207304

2017

  • Tissue-, sex- and age-specific DNA methylation of rat glucocorticoid receptor gene promoter and insulin like growth factor 2 imprinting control region.
    Agba OB, Lausser L, Huse K, Bergmeier C, Jahn N, Groth M, Bens M, Sahm A, Gall M, Witte OW, Kestler HA, Schwab M, Platzer M
    Physiol Genomics 2017, 49(11), 690-702 APSselect for distinction in scholarship in the Physiological Genomics
  • A miRNA catalogue and ncRNA annotation of the short-living fish Nothobranchius furzeri.
    Baumgart* M, Barth* E, Savino A, Groth M, Koch P, Petzold A, Arisi I, Platzer M, Marz* M, Cellerino* A
    BMC Genomics 2017, 18(1), 693 * equal contribution
  • Construction of a map-based reference genome sequence for barley, Hordeum vulgare L.
    Beier S, Himmelbach A, Colmsee C, Zhang XQ, Barrero RA, Zhang Q, Li L, Bayer M, Bolser D, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Sampath D, Heavens D, Cao S, Chapman B, Dai F, Han Y, Li H, Li X, Lin C, McCooke JK, Tan C, Wang S, Yin S, Zhou G, Poland JA, Bellgard MI, Houben A, Doležel J, Ayling S, Lonardi S, Langridge P, Muehlbauer GJ, Kersey P, Clark MD, Caccamo M, Schulman AH, Platzer M, Close TJ, Hansson M, Zhang G, Braumann I, Li C, Waugh R, Scholz U, Stein N, Mascher M
    Sci Data 2017, 4, 170044
  • Development and application of RNA-seq bioinformatic tools to explore non-model organisms in ageing research
    Bens M
    Dissertation 2017, Jena, Germany
  • Transcriptional profiling reveals protective mechanisms in brains of long-lived mice.
    Frahm C, Srivastava A, Schmidt S, Mueller J, Groth M, Guenther M, Ji Y, Priebe S, Platzer M, Witte OW
    Neurobiol Aging 2017, 52, 23-31
  • Verification and characterization of an alternative low density lipoprotein receptor-related protein 1 splice variant.
    Kolb M, Kurz S, Schäfer A, Huse K, Dietz A, Wichmann G, Birkenmeier G
    PLoS One 2017, 12(6), e0180354
  • The anti-tumorigenic activity of A2M-A lesson from the naked mole-rat.
    Kurz S, Thieme R, Amberg R, Groth M, Jahnke HG, Pieroh P, Horn LC, Kolb M, Huse K, Platzer M, Volke D, Dehghani F, Buzdin A, Engel K, Robitzki A, Hoffmann R, Gockel I, Birkenmeier G
    PLoS One 2017, 12(12), e0189514
  • A chromosome conformation capture ordered sequence of the barley genome.
    Mascher M, Gundlach H, Himmelbach A, Beier S, Twardziok SO, Wicker T, Radchuk V, Dockter C, Hedley PE, Russell J, Bayer M, Ramsay L, Liu H, Haberer G, Zhang XQ, Zhang Q, Barrero RA, Li L, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Bolser D, Colmsee C, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Chailyan A, Sampath D, Heavens D, Clissold L, Cao S, Chapman B, Dai F, Han Y, Li H, Li X, Lin C, McCooke JK, Tan C, Wang P, Wang S, Yin S, Zhou G, Poland JA, Bellgard MI, Borisjuk L, Houben A, Doležel J, Ayling S, Lonardi S, Kersey P, Langridge P, Muehlbauer GJ, Clark MD, Caccamo M, Schulman AH, Mayer KFX, Platzer M, Close TJ, Scholz U, Hansson M, Zhang G, Braumann I, Spannagl M, Li C, Waugh R, Stein N
    Nature 2017, 544(7651), 427-33
  • The Wilms tumor protein Wt1 contributes to female fertility by regulating oviductal proteostasis.
    Nathan A, Reinhardt P, Kruspe D, Jörß T, Groth M, Nolte H, Habenicht A, Herrmann J, Holschbach V, Toth B, Krüger M, Wang ZQ, Platzer M, Englert C
    Hum Mol Genet 2017, 26(9), 1694-705
  • Alternative splicing of SMPD1 coding for acid sphingomyelinase in major depression.
    Rhein C, Reichel M, Kramer M, Rotter A, Lenz B, Mühle C, Gulbins E, Kornhuber J
    J Affect Disord 2017, 209, 10-5
  • Positive Selektion in langlebigen Nagern und kurzlebigen Fischen : eine bioinformatische Suche nach der genetischen Basis des Alterns
    Sahm A
    Dissertation 2017, Jena, Germany
  • Parallel evolution of genes controlling mitonuclear balance in short-lived annual fishes.
    Sahm A, Bens M, Platzer M, Cellerino A
    Aging Cell 2017, 16(3), 488-96
  • PosiGene: automated and easy-to-use pipeline for genome-wide detection of positively selected genes.
    Sahm A, Bens M, Platzer M, Szafranski K
    Nucleic Acids Res 2017, 45(11), e100