Ori Research Group

Publications

2019

  • Quantitation of Reactive Acyl-CoA Species Mediated Protein Acylation by HPLC-MS/MS.
    Baldensperger T, Simone DS, Ori A, Glomb MA
    Anal Chem 2019, 91(19), 12336-43
  • Cohesin-mediated NF-κB signaling limits hematopoietic stem cell self-renewal in aging and inflammation.
    Chen Z, Amro EM, Becker F, Hölzer M, Rasa SMM, Njeru SN, Han B, Di Sanzo S, Chen Y, Tang D, Tao S, Haenold R, Groth M, Romanov VS, Kirkpatrick JM, Kraus JM, Kestler HA, Marz M, Ori A, Neri F, Morita** Y, Rudolph** KL
    J Exp Med 2019, 216(1), 152-75 ** co-corresponding authors
  • Profiling of gallbladder carcinoma reveals distinct miRNA profiles and activation of STAT1 by the tumor suppressive miRNA-145-5p.
    Goeppert B, Truckenmueller F, Ori A, Fritz V, Albrecht T, Fraas A, Scherer D, Silos RG, Sticht C, Gretz N, Mehrabi A, Bewerunge-Hudler M, Pusch S, Bermejo JL, Dietrich P, Schirmacher P, Renner M, Roessler S
    Sci Rep 2019, 9(1), 4796
  • Quantitative Proteome Landscape of the NCI-60 Cancer Cell Lines.
    Guo T, Luna A, Rajapakse VN, Koh CC, Wu Z, Liu W, Sun Y, Gao H, Menden MP, Xu C, Calzone L, Martignetti L, Auwerx C, Buljan M, Banaei-Esfahani A, Ori A, Iskar M, Gillet L, Bi R, Zhang J, Zhang H, Yu C, Zhong Q, Varma S, Schmitt U, Qiu P, Zhang Q, Zhu Y, Wild PJ, Garnett MJ, Bork P, Beck M, Liu K, Saez-Rodriguez J, Elloumi F, Reinhold WC, Sander C, Pommier Y, Aebersold R
    iScience 2019 (epub ahead of print)
  • Nucleoporin Nup155 is part of the p53 network in liver cancer.
    Holzer K, Ori A, Cooke A, Dauch D, Drucker E, Riemenschneider P, Andres-Pons A, DiGuilio AL, Mackmull MT, Baßler J, Roessler S, Breuhahn K, Zender L, Glavy JS, Dombrowski F, Hurt E, Schirmacher P, Beck M, Singer S
    Nat Commun 2019, 10(1), 2147
  • Reduced proteasome activity in the aging brain results in ribosome stoichiometry loss and aggregation.
    Kelmer Sacramento* E, Kirkpatrick* JM, Mazzetto* M, Di Sanzo S, Caterino C, Sanguanini M, Papaevgeniou N, Lefaki M, Childs D, Bagnoli S, Terzibasi Tozzini E, Bartolome A, Romanov N, Baumgart M, Huber W, Chondrogianni N, Vendruscolo M, Cellerino** A, Ori** A
    bioRxiv 2019, https://doi.org/10.1101/577478 * equal contribution, ** co-corresponding authors
  • Comparison of protein quantification in a complex background by DIA and TMT workflows with fixed instrument time.
    Muntel* J, Kirkpatrick* J, Bruderer R, Huang T, Vitek O, Ori** A, Reiter** L
    J Proteome Res 2019, 18(3), 1340-51 * equal contribution, ** co-senior authors
  • Metastatic-niche labelling reveals parenchymal cells with stem features.
    Ombrato L, Nolan E, Kurelac I, Mavousian A, Bridgeman VL, Heinze I, Chakravarty P, Horswell S, Gonzalez-Gualda E, Matacchione G, Weston A, Kirkpatrick J, Husain E, Speirs V, Collinson L, Ori A, Lee JH, Malanchi I
    Nature 2019, 572(7771), 603-8
  • Disentangling Genetic and Environmental Effects on the Proteotypes of Individuals.
    Romanov N, Kuhn M, Aebersold R, Ori A, Beck M, Bork P
    Cell 2019, 177(5), 1308-18

2018

  • Spatial tissue proteomics quantifies inter- and intra-tumor heterogeneity in hepatocellular carcinoma.
    Buczak* K, Ori* A, Kirkpatrick JM, Holzer K, Dauch D, Roessler S, Endris V, Lasitschka F, Parca L, Schmidt A, Zender L, Schirmacher P, Krijgsveld J, Singer** S, Beck** M
    Mol Cell Proteomics 2018, 17(4), 810-25 * equal contribution, ** co-corresponding authors