Forschungsgruppe Hoffmann

Ausgewählte Publikationen

    Publikationen am FLI

    2021

    • Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use cases.
      Mayer* G, Müller* W, Schork K, Uszkoreit J, Weidemann A, Wittig U, Rey M, Quast C, Felden J, Glöckner FO, Lange M, Arend D, Beier S, Junker A, Scholz U, Schüler D, Kestler HA, Wibberg D, Pühler A, Twardziok S, Eils J, Eils R, Hoffmann S, Eisenacher M, Turewicz M
      Brief Bioinform 2021, 22(5) * equal contribution
    • A perceptually optimised bivariate visualisation scheme for high-dimensional fold-change data
      Müller* A, Lausser* L, Wilhelm A, Ropinski T, Platzer M, Neumann** H, Kestler** HA
      ADV DATA ANAL CLASSI 2021, https://doi.org/10.1007/s11634-0 * equal contribution, ** co-corresponding authors
    • Comprehensive Characterization of Multitissue Expression Landscape, Co-Expression Networks and Positive Selection in Pikeperch.
      Nguinkal JA, Verleih M, de Los Ríos-Pérez L, Brunner RM, Sahm A, Bej S, Rebl A, Goldammer T
      Cells 2021, 10(9)
    • Increased longevity due to sexual activity in mole-rats is associated with transcriptional changes in HPA stress axis.
      Sahm* A, Platzer M, Koch P, Henning Y, Bens M, Groth M, Burda H, Begall S, Ting S, Goetz M, Van Daele P, Staniszewska M, Klose J, Costa PF, Hoffmann** S, Szafranski** K, Dammann** P
      Elife 2021, 10, e57843 ** co-senior authors, * corresponding author
    • An analysis of methylome evolution in primates
      Sahm** A, Koch P, Horvath S, Hoffmann** S
      Mol Biol Evol 2021, 38(11), 4700-14 ** co-corresponding authors
    • Loss of hepatic Mboat7 leads to liver fibrosis.
      Thangapandi VR, Knittelfelder O, Brosch M, Patsenker E, Vvedenskaya O, Buch S, Hinz S, Hendricks A, Nati M, Herrmann A, Rekhade DR, Berg T, Matz-Soja M, Huse K, Klipp E, Pauling JK, Wodke JA, Miranda Ackerman J, Bonin Mv, Aigner E, Datz C, von Schönfels W, Nehring S, Zeissig S, Röcken C, Dahl A, Chavakis T, Stickel F, Shevchenko A, Schafmayer C, Hampe J, Subramanian P
      Gut 2021, 70(5), 940-50
    • p63 and p53: Collaborative Partners or Dueling Rivals?
      Woodstock DL, Sammons MA, Fischer M
      Front Cell Dev Biol 2021, 9, 701986

    2020

    • Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer.
      Akdemir KC, Le VT, Chandran S, Li Y, Verhaak RG, Beroukhim R, Campbell PJ, Chin L, Dixon JR, Futreal PA, PCAWG Structural Variation Working Group, PCAWG Consortium
      Nat Genet 2020, 52(3), 294-305
    • The repertoire of mutational signatures in human cancer.
      Alexandrov LB, Kim J, Haradhvala NJ, Huang MN, Tian Ng AW, Wu Y, Boot A, Covington KR, Gordenin DA, Bergstrom EN, Islam SMA, Lopez-Bigas N, Klimczak LJ, McPherson JR, Morganella S, Sabarinathan R, Wheeler DA, Mustonen V, PCAWG Mutational Signatures Working Group, Getz G, Rozen SG, Stratton MR, PCAWG Consortium
      Nature 2020, 578(7793), 94-101
    • Pan-cancer analysis of whole genomes.
      Campbell PJ, Getz G, Korbel Jea, ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium
      Nature 2020, 578(7793), 82-93