Platzer Research Group

Publications

2018

  • Transcriptomic alterations during ageing reflect the shift from cancer to degenerative diseases in the elderly.
    Aramillo Irizar P, Schäuble S, Esser D, Groth M, Frahm C, Priebe S, Baumgart M, Hartmann N, Marthandan S, Menzel U, Müller J, Schmidt S, Ast V, Caliebe A, König R, Krawczak M, Ristow M, Schuster S, Cellerino A, Diekmann S, Englert C, Hemmerich P, Sühnel J, Guthke R, Witte OW, Platzer M, Ruppin E, Kaleta C
    Nat Commun 2018, 9(1), 327
  • The Pseudogenes of Barley.
    Prade VM, Gundlach H, Twardziok S, Chapman B, Tan C, Langridge P, Schulman AH, Stein N, Waugh R, Zhang G, Platzer M, Li C, Spannagl M, Mayer KFX
    Plant J 2018, 93(3), 502-14
  • Haplotypes composed of minor frequency single nucleotide polymorphism of tnf gene protect from progression into sepsis: A study using the new sepsis classification.
    Retsas T, Huse K, Lazaridis LD, Karampela N, Bauer M, Platzer M, Kolonia V, Papageorgiou E, Giamarellos-Bourboulis EJ, Dimopoulos G
    Int J Infect Dis 2018, 67, 102-6
  • The Definition of Open Reading Frame Revisited.
    Sieber P, Platzer M, Schuster S
    Trends Genet 2018 (epub ahead of print)

2017

  • Tissue-, sex- and age-specific DNA methylation of rat glucocorticoid receptor gene promoter and insulin like growth factor 2 imprinting control region.
    Agba OB, Lausser L, Huse K, Bergmeier C, Jahn N, Groth M, Bens M, Sahm A, Gall M, Witte OW, Kestler HA, Schwab M, Platzer M
    Physiol Genomics 2017, 49(11), 690-702 APSselect for distinction in scholarship in the Physiological Genomics
  • A miRNA catalogue and ncRNA annotation of the short-living fish Nothobranchius furzeri.
    Baumgart* M, Barth* E, Savino A, Groth M, Koch P, Petzold A, Arisi I, Platzer M, Marz* M, Cellerino* A
    BMC Genomics 2017, 18(1), 693 * equal contribution
  • Construction of a map-based reference genome sequence for barley, Hordeum vulgare L.
    Beier S, Himmelbach A, Colmsee C, Zhang XQ, Barrero RA, Zhang Q, Li L, Bayer M, Bolser D, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Sampath D, Heavens D, Cao S, Chapman B, Dai F, Han Y, Li H, Li X, Lin C, McCooke JK, Tan C, Wang S, Yin S, Zhou G, Poland JA, Bellgard MI, Houben A, Doležel J, Ayling S, Lonardi S, Langridge P, Muehlbauer GJ, Kersey P, Clark MD, Caccamo M, Schulman AH, Platzer M, Close TJ, Hansson M, Zhang G, Braumann I, Li C, Waugh R, Scholz U, Stein N, Mascher M
    Sci Data 2017, 4, 170044
  • Transcriptional profiling reveals protective mechanisms in brains of long-lived mice.
    Frahm C, Srivastava A, Schmidt S, Mueller J, Groth M, Guenther M, Ji Y, Priebe S, Platzer M, Witte OW
    Neurobiol Aging 2017, 52, 23-31
  • Verification and characterization of an alternative low density lipoprotein receptor-related protein 1 splice variant.
    Kolb M, Kurz S, Schäfer A, Huse K, Dietz A, Wichmann G, Birkenmeier G
    PLoS One 2017, 12(6), e0180354
  • The anti-tumorigenic activity of A2M-A lesson from the naked mole-rat.
    Kurz S, Thieme R, Amberg R, Groth M, Jahnke HG, Pieroh P, Horn LC, Kolb M, Huse K, Platzer M, Volke D, Dehghani F, Buzdin A, Engel K, Robitzki A, Hoffmann R, Gockel I, Birkenmeier G
    PLoS One 2017, 12(12), e0189514
  • A chromosome conformation capture ordered sequence of the barley genome.
    Mascher M, Gundlach H, Himmelbach A, Beier S, Twardziok SO, Wicker T, Radchuk V, Dockter C, Hedley PE, Russell J, Bayer M, Ramsay L, Liu H, Haberer G, Zhang XQ, Zhang Q, Barrero RA, Li L, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Bolser D, Colmsee C, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Chailyan A, Sampath D, Heavens D, Clissold L, Cao S, Chapman B, Dai F, Han Y, Li H, Li X, Lin C, McCooke JK, Tan C, Wang P, Wang S, Yin S, Zhou G, Poland JA, Bellgard MI, Borisjuk L, Houben A, Doležel J, Ayling S, Lonardi S, Kersey P, Langridge P, Muehlbauer GJ, Clark MD, Caccamo M, Schulman AH, Mayer KFX, Platzer M, Close TJ, Scholz U, Hansson M, Zhang G, Braumann I, Spannagl M, Li C, Waugh R, Stein N
    Nature 2017, 544(7651), 427-33
  • The Wilms tumor protein Wt1 contributes to female fertility by regulating oviductal proteostasis.
    Nathan A, Reinhardt P, Kruspe D, Jörß T, Groth M, Nolte H, Habenicht A, Herrmann J, Holschbach V, Toth B, Krüger M, Wang ZQ, Platzer M, Englert C
    Hum Mol Genet 2017, 26(9), 1694-705
  • Parallel evolution of genes controlling mitonuclear balance in short-lived annual fishes.
    Sahm A, Bens M, Platzer M, Cellerino A
    Aging Cell 2017, 16(3), 488-96
  • PosiGene: automated and easy-to-use pipeline for genome-wide detection of positively selected genes.
    Sahm A, Bens M, Platzer M, Szafranski K
    Nucleic Acids Res 2017, 45(11), e100
  • (Anti-)parallel evolution of lifespan.
    Sahm A, Cellerino A
    Aging (Albany NY) 2017, 9(10), 2018-9

2016

  • Longitudinal RNA-Seq Analysis of Vertebrate Aging Identifies Mitochondrial Complex I as a Small-Molecule-Sensitive Modifier of Lifespan.
    Baumgart* M, Priebe* S, Groth* M, Hartmann* N, Menzel U, Pandolfini L, Koch P, Felder M, Ristow M, Englert C, Guthke R, Platzer M, Cellerino A
    Cell Syst 2016, 2(2), 122-32 * equal contribution
  • Multiplex sequencing of bacterial artificial chromosomes for assembling complex plant genomes.
    Beier S, Himmelbach A, Schmutzer T, Felder M, Taudien S, Mayer KFX, Platzer M, Stein N, Scholz U, Mascher M
    Plant Biotechnol J 2016, 14(7), 1511-22
  • FRAMA: from RNA-seq data to annotated mRNA assemblies.
    Bens M, Sahm A, Groth M, Jahn N, Morhart M, Holtze S, Hildebrandt TB, Platzer M, Szafranski K
    BMC Genomics 2016, 17(1), 54
  • Analysis of cultivable microbiota and diet intake pattern of the long-lived naked mole-rat.
    Debebe T, Holtze S, Morhart M, Hildebrandt TB, Rodewald S, Huse K, Platzer M, Wyohannes D, Yirga S, Lemma A, Thieme R, König B, Birkenmeier G
    Gut Pathog 2016, 8, 25
  • Ethyl Pyruvate: An Anti-Microbial Agent that Selectively Targets Pathobionts and Biofilms.
    Debebe T, Krüger M, Huse K, Kacza J, Mühlberg K, König B, Birkenmeier G
    PLoS One 2016, 11(9), e0162919